Genome Meta Information: Parvimonas micra EYE_25 (GCA_023148225.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_023148225.1 | ||
| HOMD Taxon-ID | HMT-0111 | ||
| Species Name (in use by HOMD) | Parvimonas micra | ||
| Organism Name (as deposited) | HMT-111 Parvimonas micra EYE_25 | ||
| Strain or Isolate | EYE_25 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Parvimonas; s__Parvimonas micra |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 200 | ||
| Contigs |
|
||
| Total Sequence Length | 1,658,119 (bp) | ||
| GC Percentage | 28.59 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/148/225/GCA_023148225.1_ASM2314822v1 | ||
| CDS | 1508 | ||
| Genes | 1591 | ||
| mRNA | 1591 | ||
| misc RNA | 35 | ||
| rRNA | 8 | ||
| tRNA | 39 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.44 % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 3 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2314822v1 |
| GenBank Assembly Accession | GCA_023148225.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_023148225.1 [NCBI] |
| BioSample | SAMN19899803 [NCBI] |
| BioProject | PRJNA741708 [NCBI] |
| Submitter | China CDC |
| Submission Date | 2021-06-27T03:54:39.913 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JAHXOC01 |
| NCBI TaxID | 33033 |
| Isolation Source | ocular surface of healthy person |
| Geo Location | China:Shanxi |
