Genome Meta Information: Neisseria perflava CCUG 17915 (GCA_023472875.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_023472875.1 | ||
| HOMD Taxon-ID | HMT-0101 | ||
| Species Name (in use by HOMD) | Neisseria perflava | ||
| Organism Name (as deposited) | HMT-101 Neisseria perflava CCUG 17915 | ||
| Strain or Isolate | CCUG 17915 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria perflava |
||
| Sequencing Technology | Illumina NovaSeq | ||
| Genome Coverage | 300 | ||
| Contigs |
|
||
| Total Sequence Length | 2,265,569 (bp) | ||
| GC Percentage | 49.11 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/472/875/GCA_023472875.1_ASM2347287v1 | ||
| CDS | 2173 | ||
| Genes | 2244 | ||
| mRNA | 2244 | ||
| misc RNA | 18 | ||
| rRNA | 3 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 97.04 % | ||
| CheckM Contamination | 0.4 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2347287v1 |
| GenBank Assembly Accession | GCA_023472875.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_023472875.1 [NCBI] |
| BioSample | SAMN28187201 [NCBI] |
| BioProject | PRJNA305687 [NCBI] |
| Submitter | University of Gothenburg - CCUG |
| Submission Date | 2022-05-11T05:51:04.676 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAMDHR01 |
| NCBI TaxID | 33053 |
| Isolation Source | Missing |
| Geo Location | Missing |
