Taxon Table | Genome Table
Genome Meta Information:
Prevotella
timonensis
TCVGH (GCA_023522295.1)
| HOMD Genome-ID |
GCA_023522295.1
|
| HOMD Taxon-ID |
HMT-0798
|
| Species Name (in use by HOMD) |
Prevotella timonensis
|
| Organism Name (as deposited) |
HMT-798 Prevotella timonensis TCVGH
|
| Strain or Isolate |
TCVGH
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella;
s__Prevotella timonensis |
| Sequencing Technology |
Illumina
|
| Genome Coverage |
478
|
| Contigs |
Number of Contigs: 149
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
3,061,518 (bp) |
| GC Percentage |
42.6
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/522/295/GCA_023522295.1_ASM2352229v1
|
| CDS |
2576
|
| Genes |
2646
|
| mRNA |
2646
|
| misc RNA |
20
|
| rRNA |
4
|
| tRNA |
45
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
99.17 %
|
| CheckM Contamination |
0 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
Ambiguous
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM2352229v1
|
| GenBank Assembly Accession |
GCA_023522295.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_023522295.1
[NCBI]
|
| BioSample |
SAMN09041724
[NCBI]
|
| BioProject |
PRJNA454797
[NCBI]
|
| Submitter |
National Chung Cheng University
|
| Submission Date |
2018-05-03T06:33:06.540
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
QFFX01
|
| NCBI TaxID |
2182433
|
| Isolation Source |
Abscess
|
| Geo Location |
Taiwan
|
