Genome Meta Information: Brevundimonas diminuta S 4446-7 (GCA_024129445.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_024129445.1 | ||
| HOMD Taxon-ID | HMT-0590 | ||
| Species Name (in use by HOMD) | Brevundimonas diminuta | ||
| Organism Name (as deposited) | HMT-590 Brevundimonas diminuta S 4446-7 | ||
| Strain or Isolate | S 4446-7 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas; s__Brevundimonas diminuta_B |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 30 | ||
| Contigs |
|
||
| Total Sequence Length | 3,281,034 (bp) | ||
| GC Percentage | 66.91 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/129/445/GCA_024129445.1_ASM2412944v1 | ||
| CDS | 3111 | ||
| Genes | 3181 | ||
| mRNA | 3181 | ||
| misc RNA | 15 | ||
| rRNA | 3 | ||
| tRNA | 52 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | 89.91 % | ||
| CheckM Completeness | 99.64 % | ||
| CheckM Contamination | 1.11 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2412944v1 |
| GenBank Assembly Accession | GCA_024129445.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_024129445.1 [NCBI] |
| BioSample | SAMN29162688 [NCBI] |
| BioProject | PRJNA844552 [NCBI] |
| Submitter | Palacky University Olomouc |
| Submission Date | 2022-06-17T06:08:04.510 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAMXYD01 |
| NCBI TaxID | 293 |
| Isolation Source | |
| Geo Location | Czech Republic: Moravia |
