Genome Meta Information: Neisseria flavescens HP0015 (GCA_024205745.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_024205745.1 | ||
| HOMD Taxon-ID | HMT-0610 | ||
| Species Name (in use by HOMD) | Neisseria flavescens | ||
| Organism Name (as deposited) | HMT-610 Neisseria flavescens HP0015 | ||
| Strain or Isolate | HP0015 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria flavescens_B |
||
| Sequencing Technology | PacBio RSII | ||
| Genome Coverage | 206.32 | ||
| Contigs |
|
||
| Total Sequence Length | 2,213,981 (bp) | ||
| GC Percentage | 49.03 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/205/745/GCA_024205745.1_ASM2420574v1 | ||
| CDS | 2087 | ||
| Genes | 2204 | ||
| mRNA | 2204 | ||
| misc RNA | 46 | ||
| rRNA | 12 | ||
| tRNA | 58 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.6 % | ||
| CheckM Completeness | 95.23 % | ||
| CheckM Contamination | 0.2 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2420574v1 |
| GenBank Assembly Accession | GCA_024205745.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_024205745.1 [NCBI] |
| BioSample | SAMN18320767 [NCBI] |
| BioProject | PRJNA714914 [NCBI] |
| Submitter | Nanyang Technological University |
| Submission Date | 2021-03-16T13:34:04.040 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 28449 |
| Isolation Source | |
| Geo Location | Singapore: Singapore |
