Genome Meta Information: Neisseria flavescens HP0069 (GCA_024205785.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_024205785.1 | ||
| HOMD Taxon-ID | HMT-0610 | ||
| Species Name (in use by HOMD) | Neisseria flavescens | ||
| Organism Name (as deposited) | HMT-610 Neisseria flavescens HP0069 | ||
| Strain or Isolate | HP0069 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria flavescens_B |
||
| Sequencing Technology | PacBio RSII | ||
| Genome Coverage | 240.35 | ||
| Contigs |
|
||
| Total Sequence Length | 2,277,784 (bp) | ||
| GC Percentage | 48.97 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/205/785/GCA_024205785.1_ASM2420578v1 | ||
| CDS | 2123 | ||
| Genes | 2241 | ||
| mRNA | 2241 | ||
| misc RNA | 40 | ||
| rRNA | 15 | ||
| tRNA | 62 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.66 % | ||
| CheckM Completeness | 94.78 % | ||
| CheckM Contamination | 0.72 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2420578v1 |
| GenBank Assembly Accession | GCA_024205785.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_024205785.1 [NCBI] |
| BioSample | SAMN18320765 [NCBI] |
| BioProject | PRJNA714914 [NCBI] |
| Submitter | Nanyang Technological University |
| Submission Date | 2021-03-16T13:34:04.013 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 28449 |
| Isolation Source | |
| Geo Location | Singapore: Singapore |
