Genome Meta Information: Haemophilus sputorum MRSN940243 (GCA_024384655.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_024384655.1 | ||
| HOMD Taxon-ID | HMT-0944 | ||
| Species Name (in use by HOMD) | Haemophilus sputorum | ||
| Organism Name (as deposited) | HMT-944 Haemophilus sputorum MRSN940243 | ||
| Strain or Isolate | MRSN940243 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus_A; s__Haemophilus_A sputorum |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 132 | ||
| Contigs |
|
||
| Total Sequence Length | 2,024,133 (bp) | ||
| GC Percentage | 39.43 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/384/655/GCA_024384655.1_ASM2438465v1 | ||
| CDS | 1914 | ||
| Genes | 1991 | ||
| mRNA | 1991 | ||
| misc RNA | 23 | ||
| rRNA | 4 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.37 % | ||
| CheckM Completeness | 99.66 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2438465v1 |
| GenBank Assembly Accession | GCA_024384655.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_024384655.1 [NCBI] |
| BioSample | SAMN29768393 [NCBI] |
| BioProject | PRJNA859155 [NCBI] |
| Submitter | Walter Reed Army Institute of Research |
| Submission Date | 2022-07-15T15:01:05.640 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JANFLW01 |
| NCBI TaxID | 1078480 |
| Isolation Source | blood |
| Geo Location | USA: Maryland |
