Genome Meta Information: Peptostreptococcus anaerobius DFI.6.106 (GCA_024462755.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_024462755.1 | ||
| HOMD Taxon-ID | HMT-0542 | ||
| Species Name (in use by HOMD) | Peptostreptococcus anaerobius | ||
| Organism Name (as deposited) | HMT-542 Peptostreptococcus anaerobius DFI.6.106 | ||
| Strain or Isolate | DFI.6.106 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Peptostreptococcus; s__Peptostreptococcus anaerobius |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,088,515 (bp) | ||
| GC Percentage | 35.76 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/462/755/GCA_024462755.1_ASM2446275v1 | ||
| CDS | 1837 | ||
| Genes | 1915 | ||
| mRNA | 1915 | ||
| misc RNA | 40 | ||
| rRNA | 5 | ||
| tRNA | 32 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.06 % | ||
| CheckM Completeness | 93.53 % | ||
| CheckM Contamination | 4.51 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2446275v1 |
| GenBank Assembly Accession | GCA_024462755.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_024462755.1 [NCBI] |
| BioSample | SAMN28944518 [NCBI] |
| BioProject | PRJNA792599 [NCBI] |
| Submitter | University of Chicago |
| Submission Date | 2022-06-09T14:20:06.483 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JANGBY01 |
| NCBI TaxID | 1261 |
| Isolation Source | fecal sample |
| Geo Location | USA:Chicago |
