Genome Meta Information: Corynebacterium singulare BF-R-2 (GCA_024586525.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_024586525.1 | ||
| HOMD Taxon-ID | HMT-0063 | ||
| Species Name (in use by HOMD) | Corynebacterium singulare | ||
| Organism Name (as deposited) | HMT-063 Corynebacterium singulare BF-R-2 | ||
| Strain or Isolate | BF-R-2 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium singulare |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 152 | ||
| Contigs |
|
||
| Total Sequence Length | 2,804,100 (bp) | ||
| GC Percentage | 60.17 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/586/525/GCA_024586525.1_ASM2458652v1 | ||
| CDS | 2593 | ||
| Genes | 2659 | ||
| mRNA | 2659 | ||
| misc RNA | 6 | ||
| rRNA | 6 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.9 % | ||
| CheckM Contamination | 0.46 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2458652v1 |
| GenBank Assembly Accession | GCA_024586525.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_024586525.1 [NCBI] |
| BioSample | SAMN28196990 [NCBI] |
| BioProject | PRJNA837354 [NCBI] |
| Submitter | Kyungpook National University |
| Submission Date | 2022-05-12T02:25:03.890 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JAMFTP01 |
| NCBI TaxID | 2943494 |
| Isolation Source | feces |
| Geo Location | South Korea: Daegu |
