Genome Meta Information: Bifidobacterium breve BIF195 (GCA_024665435.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_024665435.1 | ||
| HOMD Taxon-ID | HMT-0889 | ||
| Species Name (in use by HOMD) | Bifidobacterium breve | ||
| Organism Name (as deposited) | HMT-889 Bifidobacterium breve BIF195 | ||
| Strain or Isolate | BIF195 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium; s__Bifidobacterium breve |
||
| Sequencing Technology | Oxford Nanopore MiniION, Illumina MiSeq | ||
| Genome Coverage | 69 | ||
| Contigs |
|
||
| Total Sequence Length | 2,336,700 (bp) | ||
| GC Percentage | 58.71 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/665/435/GCA_024665435.1_ASM2466543v1 | ||
| CDS | 1932 | ||
| Genes | 2005 | ||
| mRNA | 2005 | ||
| misc RNA | 11 | ||
| rRNA | 8 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.07 % | ||
| CheckM Completeness | 99.19 % | ||
| CheckM Contamination | 0.72 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2466543v1 |
| GenBank Assembly Accession | GCA_024665435.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_024665435.1 [NCBI] |
| BioSample | SAMN29862206 [NCBI] |
| BioProject | PRJNA860779 [NCBI] |
| Submitter | Chr. Hansen A/S |
| Submission Date | 2022-07-21T05:47:03.336 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1685 |
| Isolation Source | |
| Geo Location | not applicable |
