Genome Meta Information: Bacteroides thetaiotaomicron BFG-350 (GCA_024789025.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_024789025.1 | ||
| HOMD Taxon-ID | HMT-0970 | ||
| Species Name (in use by HOMD) | Bacteroides thetaiotaomicron | ||
| Organism Name (as deposited) | HMT-970 Bacteroides thetaiotaomicron BFG-350 | ||
| Strain or Isolate | BFG-350 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides; s__Bacteroides thetaiotaomicron |
||
| Sequencing Technology | Oxford Nanopore GridION | ||
| Genome Coverage | 107 | ||
| Contigs |
|
||
| Total Sequence Length | 6,712,364 (bp) | ||
| GC Percentage | 43.13 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/789/025/GCA_024789025.1_ASM2478902v1 | ||
| CDS | 5572 | ||
| Genes | 5683 | ||
| mRNA | 5683 | ||
| misc RNA | 24 | ||
| rRNA | 15 | ||
| tRNA | 71 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.16 % | ||
| CheckM Completeness | 91.27 % | ||
| CheckM Contamination | 0.8 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2478902v1 |
| GenBank Assembly Accession | GCA_024789025.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_024789025.1 [NCBI] |
| BioSample | SAMN30323299 [NCBI] |
| BioProject | PRJNA646575 [NCBI] |
| Submitter | National Institute of Allergy and Infectious Disease |
| Submission Date | 2022-08-15T15:49:06.170 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JANUTA01 |
| NCBI TaxID | 818 |
| Isolation Source | |
| Geo Location | USA: Bethesda |
