Genome Meta Information: Granulicatella adiacens p3-SID1692 (GCA_025150805.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_025150805.1 | ||
| HOMD Taxon-ID | HMT-0534 | ||
| Species Name (in use by HOMD) | Granulicatella adiacens | ||
| Organism Name (as deposited) | HMT-534 Granulicatella adiacens p3-SID1692 | ||
| Strain or Isolate | p3-SID1692 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Granulicatella; s__Granulicatella adiacens |
||
| Sequencing Technology | Illumina NextSeq 550 | ||
| Genome Coverage | 223 | ||
| Contigs |
|
||
| Total Sequence Length | 1,854,876 (bp) | ||
| GC Percentage | 37.81 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/025/150/805/GCA_025150805.1_ASM2515080v1 | ||
| CDS | 1791 | ||
| Genes | 1862 | ||
| mRNA | 1862 | ||
| misc RNA | 30 | ||
| rRNA | 4 | ||
| tRNA | 36 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.3 % | ||
| CheckM Completeness | 94.71 % | ||
| CheckM Contamination | 0.64 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2515080v1 |
| GenBank Assembly Accession | GCA_025150805.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_025150805.1 [NCBI] |
| BioSample | SAMN25653612 [NCBI] |
| BioProject | PRJNA803478 [NCBI] |
| Submitter | University of Wisconsin - Madison |
| Submission Date | 2022-02-04T14:00:13.833 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JALXTO01 |
| NCBI TaxID | 46124 |
| Isolation Source | Occiput swab |
| Geo Location | USA: Wisconsin, Madison |
