Taxon Table | Genome Table
Genome Meta Information:
Paenibacillus
phoenicis
p3-SID1389 (GCA_025151705.1)
| HOMD Genome-ID |
GCA_025151705.1
|
| HOMD Taxon-ID |
HMT-0786
|
| Species Name (in use by HOMD) |
Paenibacillus phoenicis
|
| Organism Name (as deposited) |
HMT-786 Paenibacillus phoenicis p3-SID1389
|
| Strain or Isolate |
p3-SID1389
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Paenibacillales;f__Paenibacillaceae;g__Fontibacillus;
s__Fontibacillus phoenicis |
| Sequencing Technology |
Illumina NextSeq 550
|
| Genome Coverage |
78
|
| Contigs |
Number of Contigs: 143
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
4,559,896 (bp) |
| GC Percentage |
52.69
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/025/151/705/GCA_025151705.1_ASM2515170v1
|
| CDS |
4170
|
| Genes |
4297
|
| mRNA |
4297
|
| misc RNA |
56
|
| rRNA |
2
|
| tRNA |
68
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
99.72 %
|
| CheckM Contamination |
0 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM2515170v1
|
| GenBank Assembly Accession |
GCA_025151705.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_025151705.1
[NCBI]
|
| BioSample |
SAMN25653550
[NCBI]
|
| BioProject |
PRJNA803478
[NCBI]
|
| Submitter |
University of Wisconsin - Madison
|
| Submission Date |
2022-02-04T14:00:13.033
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JALXVO01
|
| NCBI TaxID |
2916364
|
| Isolation Source |
Nares swab
|
| Geo Location |
USA: Wisconsin, Madison
|
