Genome Meta Information: Neisseria gonorrhoeae 10612 (GCA_025170665.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_025170665.2 | ||
| HOMD Taxon-ID | HMT-0621 | ||
| Species Name (in use by HOMD) | Neisseria gonorrhoeae | ||
| Organism Name (as deposited) | HMT-621 Neisseria gonorrhoeae 10612 | ||
| Strain or Isolate | 10612 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria gonorrhoeae |
||
| Sequencing Technology | Illumina MiniSeq; Oxford Nanopore MinION | ||
| Genome Coverage | 566 | ||
| Contigs |
|
||
| Total Sequence Length | 2,225,204 (bp) | ||
| GC Percentage | 52.44 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/025/170/665/GCA_025170665.2_ASM2517066v2 | ||
| CDS | 2222 | ||
| Genes | 2309 | ||
| mRNA | 2309 | ||
| misc RNA | 20 | ||
| rRNA | 12 | ||
| tRNA | 54 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.54 % | ||
| CheckM Completeness | 98.84 % | ||
| CheckM Contamination | 0.19 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2517066v2 |
| GenBank Assembly Accession | GCA_025170665.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_025170665.1 [NCBI] |
| BioSample | SAMN28837864 [NCBI] |
| BioProject | PRJNA768989 [NCBI] |
| Submitter | Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, |
| Submission Date | 2022-06-02T10:17:04.660 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 485 |
| Isolation Source | urethal swab |
| Geo Location | Russia |
