Genome Meta Information: Lysinibacillus fusiformis HJ.T1 (GCA_025398895.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_025398895.1 | ||
| HOMD Taxon-ID | HMT-0614 | ||
| Species Name (in use by HOMD) | Lysinibacillus fusiformis | ||
| Organism Name (as deposited) | HMT-614 Lysinibacillus fusiformis HJ.T1 | ||
| Strain or Isolate | HJ.T1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Lysinibacillus; s__Lysinibacillus fusiformis |
||
| Sequencing Technology | Illumina NovaSeq; Oxford Nanopore MinION | ||
| Genome Coverage | 322 | ||
| Contigs |
|
||
| Total Sequence Length | 4,856,088 (bp) | ||
| GC Percentage | 37.49 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/025/398/895/GCA_025398895.1_ASM2539889v1 | ||
| CDS | 4737 | ||
| Genes | 4975 | ||
| mRNA | 4975 | ||
| misc RNA | 92 | ||
| rRNA | 37 | ||
| tRNA | 108 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.38 % | ||
| CheckM Completeness | 83.21 % | ||
| CheckM Contamination | 9.02 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2539889v1 |
| GenBank Assembly Accession | GCA_025398895.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_025398895.1 [NCBI] |
| BioSample | SAMN30880999 [NCBI] |
| BioProject | PRJNA880984 [NCBI] |
| Submitter | The Independent Schools Foundation Academy |
| Submission Date | 2022-09-15T22:35:03.993 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 28031 |
| Isolation Source | polyester fabric recovered from compost |
| Geo Location | Hong Kong: Telegraph Bay |
