Genome Meta Information: Granulicatella adiacens KHUD_009 (GCA_025642215.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_025642215.1 | ||
| HOMD Taxon-ID | HMT-0534 | ||
| Species Name (in use by HOMD) | Granulicatella adiacens | ||
| Organism Name (as deposited) | HMT-534 Granulicatella adiacens KHUD_009 | ||
| Strain or Isolate | KHUD_009 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Granulicatella; s__Granulicatella adiacens |
||
| Sequencing Technology | PacBio Sequel | ||
| Genome Coverage | 22.51 | ||
| Contigs |
|
||
| Total Sequence Length | 1,949,834 (bp) | ||
| GC Percentage | 37.81 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/025/642/215/GCA_025642215.1_ASM2564221v1 | ||
| CDS | 1853 | ||
| Genes | 1958 | ||
| mRNA | 1958 | ||
| misc RNA | 30 | ||
| rRNA | 15 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.42 % | ||
| CheckM Completeness | 94.39 % | ||
| CheckM Contamination | 0.46 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2564221v1 |
| GenBank Assembly Accession | GCA_025642215.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_025642215.1 [NCBI] |
| BioSample | SAMN30968860 [NCBI] |
| BioProject | PRJNA883546 [NCBI] |
| Submitter | Kyung Hee University |
| Submission Date | 2022-09-23T03:27:07.330 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 46124 |
| Isolation Source | |
| Geo Location | South Korea: Seoul |
