Genome Meta Information: Mobiluncus mulieris M17 (GCA_025698165.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_025698165.1 | ||
| HOMD Taxon-ID | HMT-0830 | ||
| Species Name (in use by HOMD) | Mobiluncus mulieris | ||
| Organism Name (as deposited) | HMT-830 Mobiluncus mulieris M17 | ||
| Strain or Isolate | M17 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Mobiluncus; s__Mobiluncus mulieris |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,430,094 (bp) | ||
| GC Percentage | 55.18 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/025/698/165/GCA_025698165.1_ASM2569816v1 | ||
| CDS | 2126 | ||
| Genes | 2182 | ||
| mRNA | 2182 | ||
| misc RNA | 6 | ||
| rRNA | 3 | ||
| tRNA | 45 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | 99.32 % | ||
| CheckM Completeness | 97.3 % | ||
| CheckM Contamination | 2.42 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2569816v1 |
| GenBank Assembly Accession | GCA_025698165.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_025698165.1 [NCBI] |
| BioSample | SAMN12630755 [NCBI] |
| BioProject | PRJNA561908 [NCBI] |
| Submitter | China Agricultural University |
| Submission Date | 2019-08-24T07:44:05.573 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | VTAB01 |
| NCBI TaxID | 2052 |
| Isolation Source | vaginal fluids |
| Geo Location | China: Hangzhou, Zhejiang |
