Genome Meta Information: Schlegelella thermodepolymerans LMG 21645 (GCA_026057535.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_026057535.1 | ||
| HOMD Taxon-ID | HMT-0024 | ||
| Species Name (in use by HOMD) | Schlegelella thermodepolymerans | ||
| Organism Name (as deposited) | HMT-024 Schlegelella thermodepolymerans LMG 21645 | ||
| Strain or Isolate | LMG 21645 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Caldimonas; s__Caldimonas thermodepolymerans |
||
| Sequencing Technology | Illumina MiSeq; Oxford Nanopore MinION | ||
| Genome Coverage | 150 | ||
| Contigs |
|
||
| Total Sequence Length | 3,940,444 (bp) | ||
| GC Percentage | 70.2 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/057/535/GCA_026057535.1_ASM2605753v1 | ||
| CDS | 3644 | ||
| Genes | 3723 | ||
| mRNA | 3723 | ||
| misc RNA | 16 | ||
| rRNA | 6 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.67 % | ||
| CheckM Completeness | 99.85 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2605753v1 |
| GenBank Assembly Accession | GCA_026057535.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_026057535.1 [NCBI] |
| BioSample | SAMN31484382 [NCBI] |
| BioProject | PRJNA674774 [NCBI] |
| Submitter | Brno University of Technology |
| Submission Date | 2022-10-27T10:36:04.340 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 215580 |
| Isolation Source | cultured in Erlenmeyer flask |
| Geo Location | Czech Republic |
