Genome Meta Information: Fusobacterium simiae DSM 19848 (GCA_026089295.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_026089295.1 | ||
| HOMD Taxon-ID | HMT-0447 | ||
| Species Name (in use by HOMD) | Fusobacterium simiae | ||
| Organism Name (as deposited) | HMT-447 Fusobacterium simiae DSM 19848 | ||
| Strain or Isolate | DSM 19848 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium simiae |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 76.2 | ||
| Contigs |
|
||
| Total Sequence Length | 2,481,730 (bp) | ||
| GC Percentage | 27.1 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/089/295/GCA_026089295.1_ASM2608929v1 | ||
| CDS | 2263 | ||
| Genes | 2329 | ||
| mRNA | 2329 | ||
| misc RNA | 17 | ||
| rRNA | 4 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.68 % | ||
| CheckM Contamination | 0.51 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2608929v1 |
| GenBank Assembly Accession | GCA_026089295.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_026089295.1 [NCBI] |
| BioSample | SAMN31056805 [NCBI] |
| BioProject | PRJNA884868 [NCBI] |
| Submitter | institut hospitalo-universitaire IHU |
| Submission Date | 2022-09-28T04:27:05.520 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAOXXL01 |
| NCBI TaxID | 855 |
| Isolation Source | dental plaque |
| Geo Location | missing |
