Genome Meta Information: Limosilactobacillus oris BE7N (GCA_026094485.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_026094485.1 | ||
| HOMD Taxon-ID | HMT-0709 | ||
| Species Name (in use by HOMD) | Limosilactobacillus oris | ||
| Organism Name (as deposited) | HMT-709 Limosilactobacillus oris BE7N | ||
| Strain or Isolate | BE7N | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Limosilactobacillus; s__Limosilactobacillus oris |
||
| Sequencing Technology | Illumina NovaSeq6000 platform | ||
| Genome Coverage | 427 | ||
| Contigs |
|
||
| Total Sequence Length | 2,129,000 (bp) | ||
| GC Percentage | 50.05 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/094/485/GCA_026094485.1_ASM2609448v1 | ||
| CDS | 2062 | ||
| Genes | 2136 | ||
| mRNA | 2136 | ||
| misc RNA | 24 | ||
| rRNA | 4 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.74 % | ||
| CheckM Completeness | 99.35 % | ||
| CheckM Contamination | 0.08 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2609448v1 |
| GenBank Assembly Accession | GCA_026094485.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_026094485.1 [NCBI] |
| BioSample | SAMN31562624 [NCBI] |
| BioProject | PRJNA896692 [NCBI] |
| Submitter | QuantHealth |
| Submission Date | 2022-11-01T23:35:04.023 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAPEJB01 |
| NCBI TaxID | 1632 |
| Isolation Source | |
| Geo Location | China:hainan |
