Genome Meta Information: Roseomonas mucosa HV1 (GCA_026222715.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_026222715.1 | ||
| HOMD Taxon-ID | HMT-0245 | ||
| Species Name (in use by HOMD) | Roseomonas mucosa | ||
| Organism Name (as deposited) | HMT-245 Roseomonas mucosa HV1 | ||
| Strain or Isolate | HV1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Roseomonas; s__Roseomonas mucosa |
||
| Sequencing Technology | Illumina MiSeq; PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 4,878,034 (bp) | ||
| GC Percentage | 70.44 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/222/715/GCA_026222715.1_ASM2622271v1 | ||
| CDS | 4395 | ||
| Genes | 4498 | ||
| mRNA | 4498 | ||
| misc RNA | 19 | ||
| rRNA | 15 | ||
| tRNA | 68 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.16 % | ||
| CheckM Completeness | 97.06 % | ||
| CheckM Contamination | 3.54 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2622271v1 |
| GenBank Assembly Accession | GCA_026222715.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_026222715.1 [NCBI] |
| BioSample | SAMN10281988 [NCBI] |
| BioProject | PRJNA498096 [NCBI] |
| Submitter | Igenbio, Inc |
| Submission Date | 2018-10-23T15:58:03.673 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 207340 |
| Isolation Source | Clinical, healthy, human skin |
| Geo Location | USA |
