Taxon Table | Genome Table
Genome Meta Information:
Corynebacterium
pilbarense
CCUG 57942 (GCA_026930265.1)
| HOMD Genome-ID |
GCA_026930265.1
|
| HOMD Taxon-ID |
HMT-0054
|
| Species Name (in use by HOMD) |
Corynebacterium pilbarense
|
| Organism Name (as deposited) |
HMT-054 Corynebacterium pilbarense CCUG 57942
|
| Strain or Isolate |
CCUG 57942
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium;
s__Corynebacterium pilbarense |
| Sequencing Technology |
Illumina
|
| Genome Coverage |
100
|
| Contigs |
Number of Contigs: 161
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,436,250 (bp) |
| GC Percentage |
64.17
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/930/265/GCA_026930265.1_ASM2693026v1
|
| CDS |
2197
|
| Genes |
2266
|
| mRNA |
2266
|
| misc RNA |
8
|
| rRNA |
7
|
| tRNA |
53
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
99.98 %
|
| CheckM Completeness |
97.81 %
|
| CheckM Contamination |
0.48 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM2693026v1
|
| GenBank Assembly Accession |
GCA_026930265.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_026930265.1
[NCBI]
|
| BioSample |
SAMN30225186
[NCBI]
|
| BioProject |
PRJNA868159
[NCBI]
|
| Submitter |
Guangdong Provincial Hospital of Traditional Chinese Medicine
|
| Submission Date |
2022-08-10T05:39:03.387
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JANRML01
|
| NCBI TaxID |
1288393
|
| Isolation Source |
ankle aspirate fluid from male patient
|
| Geo Location |
China: Guangzhou
|
