Genome Meta Information: Mycolicibacterium neoaurum DSM 1381 (GCA_027857015.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_027857015.1 | ||
| HOMD Taxon-ID | HMT-0692 | ||
| Species Name (in use by HOMD) | Mycolicibacterium neoaurum | ||
| Organism Name (as deposited) | HMT-692 Mycolicibacterium neoaurum DSM 1381 | ||
| Strain or Isolate | DSM 1381 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium; s__Mycobacterium neoaurum_A |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 5,578,016 (bp) | ||
| GC Percentage | 66.79 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/027/857/015/GCA_027857015.1_ASM2785701v1 | ||
| CDS | 5287 | ||
| Genes | 5366 | ||
| mRNA | 5366 | ||
| misc RNA | 27 | ||
| rRNA | 3 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 92.83 % | ||
| CheckM Completeness | 99.68 % | ||
| CheckM Contamination | 1.58 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2785701v1 |
| GenBank Assembly Accession | GCA_027857015.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_027857015.1 [NCBI] |
| BioSample | SAMN32362212 [NCBI] |
| BioProject | PRJNA914683 [NCBI] |
| Submitter | University of Chinese Academy of Sciences |
| Submission Date | 2022-12-22T05:20:04.843 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1795 |
| Isolation Source | mutagenesis |
| Geo Location | China:Shanghai |
