Genome Meta Information: Lentilactobacillus buchneri Egmn17 (GCA_028411915.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_028411915.1 | ||
| HOMD Taxon-ID | HMT-0881 | ||
| Species Name (in use by HOMD) | Lentilactobacillus buchneri | ||
| Organism Name (as deposited) | HMT-881 Lentilactobacillus buchneri Egmn17 | ||
| Strain or Isolate | Egmn17 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lentilactobacillus; s__Lentilactobacillus buchneri |
||
| Sequencing Technology | Illumina NovaSeq | ||
| Genome Coverage | 12 | ||
| Contigs |
|
||
| Total Sequence Length | 2,365,130 (bp) | ||
| GC Percentage | 44.58 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/028/411/915/GCA_028411915.1_ASM2841191v1 | ||
| CDS | 2451 | ||
| Genes | 2558 | ||
| mRNA | 2558 | ||
| misc RNA | 39 | ||
| rRNA | 8 | ||
| tRNA | 60 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | 99.46 % | ||
| CheckM Completeness | 84.22 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2841191v1 |
| GenBank Assembly Accession | GCA_028411915.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMN31178892 [NCBI] |
| BioProject | PRJNA887683 [NCBI] |
| Submitter | Baskent University |
| Submission Date | 2022-10-06T07:41:04.123 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1581 |
| Isolation Source | cheese |
| Geo Location | Turkey:Ankara |
