Genome Meta Information: Lautropia mirabilis SCCH130 Lau2261318 (GCA_028462385.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_028462385.1 | ||
| HOMD Taxon-ID | HMT-0022 | ||
| Species Name (in use by HOMD) | Lautropia mirabilis | ||
| Organism Name (as deposited) | HMT-022 Lautropia mirabilis SCCH130 Lau2261318 | ||
| Strain or Isolate | SCCH130 Lau2261318 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Lautropia; s__Lautropia mirabilis |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 96 | ||
| Contigs |
|
||
| Total Sequence Length | 3,080,931 (bp) | ||
| GC Percentage | 65.6 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/028/462/385/GCA_028462385.1_ASM2846238v1 | ||
| CDS | 2499 | ||
| Genes | 2563 | ||
| mRNA | 2563 | ||
| misc RNA | 12 | ||
| rRNA | 4 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96 % | ||
| CheckM Completeness | 90.54 % | ||
| CheckM Contamination | 0.94 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2846238v1 |
| GenBank Assembly Accession | GCA_028462385.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_028462385.1 [NCBI] |
| BioSample | SAMN31655766 [NCBI] |
| BioProject | PRJNA561493 [NCBI] |
| Submitter | N.F.Gamaleya National Research Center for Epidemiology and Microbiology |
| Submission Date | 2022-11-08T07:40:05.693 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAQOUA01 |
| NCBI TaxID | 47671 |
| Isolation Source | oropharyngeal swab |
| Geo Location | Russia:Moscow |
