Genome Meta Information: Staphylococcus warneri G1M1F (GCA_028464135.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_028464135.1 | ||
| HOMD Taxon-ID | HMT-0076 | ||
| Species Name (in use by HOMD) | Staphylococcus warneri | ||
| Organism Name (as deposited) | HMT-076 Staphylococcus warneri G1M1F | ||
| Strain or Isolate | G1M1F | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus warneri |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 60 | ||
| Contigs |
|
||
| Total Sequence Length | 2,541,809 (bp) | ||
| GC Percentage | 32.5 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/028/464/135/GCA_028464135.1_ASM2846413v1 | ||
| CDS | 2446 | ||
| Genes | 2532 | ||
| mRNA | 2532 | ||
| misc RNA | 51 | ||
| rRNA | 2 | ||
| tRNA | 32 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.65 % | ||
| CheckM Completeness | 99.64 % | ||
| CheckM Contamination | 0.06 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2846413v1 |
| GenBank Assembly Accession | GCA_028464135.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_028464135.1 [NCBI] |
| BioSample | SAMN32968848 [NCBI] |
| BioProject | PRJNA929689 [NCBI] |
| Submitter | Bangabandhu Sheikh Mujibur Rahman Agricultural University |
| Submission Date | 2023-01-31T04:35:04.533 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAQPCE01 |
| NCBI TaxID | 1292 |
| Isolation Source | feces |
| Geo Location | Bangladesh |
