Genome Meta Information: Corynebacterium pseudodiphtheriticum SCPM-O-B-9663 (Don 4) (GCA_028527725.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_028527725.1 | ||
| HOMD Taxon-ID | HMT-0060 | ||
| Species Name (in use by HOMD) | Corynebacterium pseudodiphtheriticum | ||
| Organism Name (as deposited) | HMT-060 Corynebacterium pseudodiphtheriticum SCPM-O-B-9663 (Don 4) | ||
| Strain or Isolate | SCPM-O-B-9663 (Don 4) | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium pseudodiphtheriticum |
||
| Sequencing Technology | MGISeq-2000 | ||
| Genome Coverage | 207.56 | ||
| Contigs |
|
||
| Total Sequence Length | 2,338,775 (bp) | ||
| GC Percentage | 55.2 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/028/527/725/GCA_028527725.1_ASM2852772v1 | ||
| CDS | 2114 | ||
| Genes | 2171 | ||
| mRNA | 2171 | ||
| misc RNA | 6 | ||
| rRNA | 3 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.53 % | ||
| CheckM Completeness | 98.88 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2852772v1 |
| GenBank Assembly Accession | GCA_028527725.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_028527725.1 [NCBI] |
| BioSample | SAMN31031753 [NCBI] |
| BioProject | PRJNA269675 [NCBI] |
| Submitter | SRCAMB |
| Submission Date | 2022-09-27T07:13:03.800 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAQPSK01 |
| NCBI TaxID | 37637 |
| Isolation Source | throat swab |
| Geo Location | Russia: Rostov-na-Donu |
