Genome Meta Information: Comamonas testosteroni X13 (GCA_029026905.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_029026905.1 | ||
| HOMD Taxon-ID | HMT-0858 | ||
| Species Name (in use by HOMD) | Comamonas testosteroni | ||
| Organism Name (as deposited) | HMT-858 Comamonas testosteroni X13 | ||
| Strain or Isolate | X13 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Comamonas; s__Comamonas testosteroni_F |
||
| Sequencing Technology | PacBio RS; Illumina HiSeq | ||
| Genome Coverage | 170 | ||
| Contigs |
|
||
| Total Sequence Length | 5,894,614 (bp) | ||
| GC Percentage | 61.57 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/029/026/905/GCA_029026905.1_ASM2902690v1 | ||
| CDS | 5346 | ||
| Genes | 5520 | ||
| mRNA | 5520 | ||
| misc RNA | 41 | ||
| rRNA | 24 | ||
| tRNA | 108 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.35 % | ||
| CheckM Completeness | 95.37 % | ||
| CheckM Contamination | 3.99 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2902690v1 |
| GenBank Assembly Accession | GCA_029026905.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_029026905.1 [NCBI] |
| BioSample | SAMN24624792 [NCBI] |
| BioProject | PRJNA794302 [NCBI] |
| Submitter | Zhejiang University |
| Submission Date | 2022-01-05T05:35:03.587 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 285 |
| Isolation Source | aerobic granular sludge reactor |
| Geo Location | China: Zhejiang |
