Genome Meta Information: Arthrospira platensis NCB002 (GCA_029223075.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_029223075.1 | ||
| HOMD Taxon-ID | HMT-0229 | ||
| Species Name (in use by HOMD) | Arthrospira platensis | ||
| Organism Name (as deposited) | HMT-229 Arthrospira platensis NCB002 | ||
| Strain or Isolate | NCB002 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Cyanobacteriales;f__Microcoleaceae;g__Limnospira; s__Limnospira platensis |
||
| Sequencing Technology | PacBio Sequel | ||
| Genome Coverage | 1071 | ||
| Contigs |
|
||
| Total Sequence Length | 6,864,973 (bp) | ||
| GC Percentage | 44.25 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/029/223/075/GCA_029223075.1_ASM2922307v1 | ||
| CDS | 6484 | ||
| Genes | 6946 | ||
| mRNA | 6946 | ||
| misc RNA | 408 | ||
| rRNA | 4 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.64 % | ||
| CheckM Completeness | 98.93 % | ||
| CheckM Contamination | 3.53 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 3 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2922307v1 |
| GenBank Assembly Accession | GCA_029223075.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_029223075.1 [NCBI] |
| BioSample | SAMN24858350 [NCBI] |
| BioProject | PRJNA796443 [NCBI] |
| Submitter | NCell |
| Submission Date | 2022-01-12T03:00:04.243 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JARHUM01 |
| NCBI TaxID | 2909674 |
| Isolation Source | |
| Geo Location | South Korea |
