Taxon Table | Genome Table
Genome Meta Information:
Ottowia
sp. HMT-894
10c7w1 (GCA_029813755.1)
| HOMD Genome-ID |
GCA_029813755.1
|
| HOMD Taxon-ID |
HMT-0894
|
| Species Name (in use by HOMD) |
Ottowia sp. HMT-894
|
| Organism Name (as deposited) |
HMT-894 Ottowia sp. HMT-894 10c7w1
|
| Strain or Isolate |
10c7w1
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ottowia;
s__Ottowia massiliensis |
| Sequencing Technology |
Illumina
|
| Genome Coverage |
568
|
| Contigs |
Number of Contigs: 119
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,784,541 (bp) |
| GC Percentage |
63.62
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/029/813/755/GCA_029813755.1_ASM2981375v1
|
| CDS |
2412
|
| Genes |
2478
|
| mRNA |
2478
|
| misc RNA |
13
|
| rRNA |
3
|
| tRNA |
49
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
91.21 %
|
| CheckM Contamination |
1.99 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM2981375v1
|
| GenBank Assembly Accession |
GCA_029813755.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_029813755.1
[NCBI]
|
| BioSample |
SAMN34135125
[NCBI]
|
| BioProject |
PRJNA954147
[NCBI]
|
| Submitter |
shandong university at Weihai
|
| Submission Date |
2023-04-11T00:54:02.973
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JARVII01
|
| NCBI TaxID |
3040346
|
| Isolation Source |
stomach
|
| Geo Location |
China
|
