Taxon Table | Genome Table
Genome Meta Information:
Limosilactobacillus
fermentum
LMG 6902 (GCA_029823225.1)
| HOMD Genome-ID |
GCA_029823225.1
|
| HOMD Taxon-ID |
HMT-0608
|
| Species Name (in use by HOMD) |
Limosilactobacillus fermentum
|
| Organism Name (as deposited) |
HMT-608 Limosilactobacillus fermentum LMG 6902
|
| Strain or Isolate |
LMG 6902
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Limosilactobacillus;
s__Limosilactobacillus fermentum |
| Sequencing Technology |
Illumina
|
| Genome Coverage |
71
|
| Contigs |
Number of Contigs: 112
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
1,817,617 (bp) |
| GC Percentage |
52.67
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/029/823/225/GCA_029823225.1_ASM2982322v1
|
| CDS |
1770
|
| Genes |
1855
|
| mRNA |
1855
|
| misc RNA |
25
|
| rRNA |
3
|
| tRNA |
57
|
| tmRNA |
0
|
| ANI (Average Nucluotide Identity) |
99.99 %
|
| CheckM Completeness |
96.47 %
|
| CheckM Contamination |
0.92 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM2982322v1
|
| GenBank Assembly Accession |
GCA_029823225.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_029823225.1
[NCBI]
|
| BioSample |
SAMN33225764
[NCBI]
|
| BioProject |
PRJNA933129
[NCBI]
|
| Submitter |
Chr-Hansen
|
| Submission Date |
2023-02-09T10:45:08.687
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JARACC01
|
| NCBI TaxID |
1613
|
| Isolation Source |
|
| Geo Location |
not provided
|
