Genome Meta Information: Lactobacillus gasseri DSM 20243 (GCA_029823575.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_029823575.1 | ||
| HOMD Taxon-ID | HMT-0615 | ||
| Species Name (in use by HOMD) | Lactobacillus gasseri | ||
| Organism Name (as deposited) | HMT-615 Lactobacillus gasseri DSM 20243 | ||
| Strain or Isolate | DSM 20243 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus; s__Lactobacillus gasseri |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 77 | ||
| Contigs |
|
||
| Total Sequence Length | 1,825,792 (bp) | ||
| GC Percentage | 35.01 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/029/823/575/GCA_029823575.1_ASM2982357v1 | ||
| CDS | 1742 | ||
| Genes | 1832 | ||
| mRNA | 1832 | ||
| misc RNA | 33 | ||
| rRNA | 3 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.53 % | ||
| CheckM Contamination | 0.27 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2982357v1 |
| GenBank Assembly Accession | GCA_029823575.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_029823575.1 [NCBI] |
| BioSample | SAMN33225757 [NCBI] |
| BioProject | PRJNA933129 [NCBI] |
| Submitter | Chr-Hansen |
| Submission Date | 2023-02-09T10:45:08.603 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAQZAQ01 |
| NCBI TaxID | 324831 |
| Isolation Source | |
| Geo Location | not provided |
