Genome Meta Information: Limosilactobacillus oris BSLO1801 (GCA_030053195.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030053195.1 | ||
| HOMD Taxon-ID | HMT-0709 | ||
| Species Name (in use by HOMD) | Limosilactobacillus oris | ||
| Organism Name (as deposited) | HMT-709 Limosilactobacillus oris BSLO1801 | ||
| Strain or Isolate | BSLO1801 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Limosilactobacillus; s__Limosilactobacillus oris_A |
||
| Sequencing Technology | Illumina NovaSeq; Oxford Nanopore | ||
| Genome Coverage | 435 | ||
| Contigs |
|
||
| Total Sequence Length | 2,064,446 (bp) | ||
| GC Percentage | 49.25 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/053/195/GCA_030053195.1_ASM3005319v1 | ||
| CDS | 2026 | ||
| Genes | 2134 | ||
| mRNA | 2134 | ||
| misc RNA | 30 | ||
| rRNA | 15 | ||
| tRNA | 62 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.23 % | ||
| CheckM Completeness | 99.35 % | ||
| CheckM Contamination | 0.08 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3005319v1 |
| GenBank Assembly Accession | GCA_030053195.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030053195.1 [NCBI] |
| BioSample | SAMN35006292 [NCBI] |
| BioProject | PRJNA970663 [NCBI] |
| Submitter | Sichuan Agricultural University |
| Submission Date | 2023-05-09T08:23:04.053 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1632 |
| Isolation Source | feces |
| Geo Location | China: Sichuan province |
