Genome Meta Information: Staphylococcus warneri AM_AQ_BC5 (GCA_030177215.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030177215.1 | ||
| HOMD Taxon-ID | HMT-0076 | ||
| Species Name (in use by HOMD) | Staphylococcus warneri | ||
| Organism Name (as deposited) | HMT-076 Staphylococcus warneri AM_AQ_BC5 | ||
| Strain or Isolate | AM_AQ_BC5 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus warneri_A |
||
| Sequencing Technology | Illumina Miseq | ||
| Genome Coverage | 98.3 | ||
| Contigs |
|
||
| Total Sequence Length | 2,433,960 (bp) | ||
| GC Percentage | 32.52 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/177/215/GCA_030177215.1_ASM3017721v1 | ||
| CDS | 2371 | ||
| Genes | 2487 | ||
| mRNA | 2487 | ||
| misc RNA | 55 | ||
| rRNA | 4 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.14 % | ||
| CheckM Completeness | 98.88 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3017721v1 |
| GenBank Assembly Accession | GCA_030177215.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030177215.1 [NCBI] |
| BioSample | SAMN32531199 [NCBI] |
| BioProject | PRJNA917242 [NCBI] |
| Submitter | CSIR-National Environmental Engineering Research Institute (NEERI) |
| Submission Date | 2023-01-02T06:33:04.143 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JASCSE01 |
| NCBI TaxID | 1292 |
| Isolation Source | |
| Geo Location | India: Nagpur |
