Genome Meta Information: Prevotella bivia PLW0727 (GCA_030219305.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030219305.1 | ||
| HOMD Taxon-ID | HMT-0556 | ||
| Species Name (in use by HOMD) | Prevotella bivia | ||
| Organism Name (as deposited) | HMT-556 Prevotella bivia PLW0727 | ||
| Strain or Isolate | PLW0727 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella bivia |
||
| Sequencing Technology | Illumina NovaSeq; Oxford Nanopore PromethION | ||
| Genome Coverage | 1277 | ||
| Contigs |
|
||
| Total Sequence Length | 2,427,673 (bp) | ||
| GC Percentage | 39.47 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/219/305/GCA_030219305.1_ASM3021930v1 | ||
| CDS | 2061 | ||
| Genes | 2131 | ||
| mRNA | 2131 | ||
| misc RNA | 7 | ||
| rRNA | 12 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.94 % | ||
| CheckM Completeness | 88.76 % | ||
| CheckM Contamination | 2.35 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3021930v1 |
| GenBank Assembly Accession | GCA_030219305.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030219305.1 [NCBI] |
| BioSample | SAMN35450423 [NCBI] |
| BioProject | PRJNA977105 [NCBI] |
| Submitter | Shenzhen University |
| Submission Date | 2023-05-29T03:37:04.817 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 28125 |
| Isolation Source | |
| Geo Location | China: Shenzhen |
