Genome Meta Information: Staphylococcus cohnii SDAQ-1 (GCA_030220105.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030220105.1 | ||
| HOMD Taxon-ID | HMT-0117 | ||
| Species Name (in use by HOMD) | Staphylococcus cohnii | ||
| Organism Name (as deposited) | HMT-117 Staphylococcus cohnii SDAQ-1 | ||
| Strain or Isolate | SDAQ-1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus cohnii |
||
| Sequencing Technology | DNBSEQ; PacBio RSII | ||
| Genome Coverage | 463 | ||
| Contigs |
|
||
| Total Sequence Length | 2,798,844 (bp) | ||
| GC Percentage | 32.59 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/220/105/GCA_030220105.1_ASM3022010v1 | ||
| CDS | 2637 | ||
| Genes | 2766 | ||
| mRNA | 2766 | ||
| misc RNA | 49 | ||
| rRNA | 19 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.45 % | ||
| CheckM Completeness | 99.03 % | ||
| CheckM Contamination | 0.39 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3022010v1 |
| GenBank Assembly Accession | GCA_030220105.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030220105.1 [NCBI] |
| BioSample | SAMN35037007 [NCBI] |
| BioProject | PRJNA971568 [NCBI] |
| Submitter | Qingdao Agricultural University |
| Submission Date | 2023-05-11T10:11:03.586 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 29382 |
| Isolation Source | |
| Geo Location | China:Shandong |
