Genome Meta Information: Peptoniphilus harei UMB10226A (GCA_030223965.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030223965.1 | ||
| HOMD Taxon-ID | HMT-0109 | ||
| Species Name (in use by HOMD) | Peptoniphilus harei | ||
| Organism Name (as deposited) | HMT-109 Peptoniphilus harei UMB10226A | ||
| Strain or Isolate | UMB10226A | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus_A; s__Peptoniphilus_A genitalis |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 284.91 | ||
| Contigs |
|
||
| Total Sequence Length | 1,966,886 (bp) | ||
| GC Percentage | 34.28 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/223/965/GCA_030223965.1_ASM3022396v1 | ||
| CDS | 1794 | ||
| Genes | 1873 | ||
| mRNA | 1873 | ||
| misc RNA | 37 | ||
| rRNA | 4 | ||
| tRNA | 37 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.41 % | ||
| CheckM Contamination | 1.01 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3022396v1 |
| GenBank Assembly Accession | GCA_030223965.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030223965.1 [NCBI] |
| BioSample | SAMN34998802 [NCBI] |
| BioProject | PRJNA970254 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2023-05-08T14:01:09.413 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JASOTL01 |
| NCBI TaxID | 54005 |
| Isolation Source | |
| Geo Location | USA: Maywood, IL |
