Genome Meta Information: Dialister micraerophilus UMB12087A.2 (GCA_030227545.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030227545.1 | ||
| HOMD Taxon-ID | HMT-0843 | ||
| Species Name (in use by HOMD) | Dialister micraerophilus | ||
| Organism Name (as deposited) | HMT-843 Dialister micraerophilus UMB12087A.2 | ||
| Strain or Isolate | UMB12087A.2 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Dialisteraceae;g__Dialister; s__Dialister micraerophilus |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 18.1354 | ||
| Contigs |
|
||
| Total Sequence Length | 1,407,888 (bp) | ||
| GC Percentage | 35.33 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/227/545/GCA_030227545.1_ASM3022754v1 | ||
| CDS | 1299 | ||
| Genes | 1372 | ||
| mRNA | 1372 | ||
| misc RNA | 29 | ||
| rRNA | 0 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.76 % | ||
| CheckM Completeness | 99.14 % | ||
| CheckM Contamination | 1.09 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3022754v1 |
| GenBank Assembly Accession | GCA_030227545.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030227545.1 [NCBI] |
| BioSample | SAMN35153980 [NCBI] |
| BioProject | PRJNA970254 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2023-05-18T09:46:08.380 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JASOZS01 |
| NCBI TaxID | 309120 |
| Isolation Source | bladder urine |
| Geo Location | USA: Maywood, IL |
