Genome Meta Information: Dialister micraerophilus UMB10230B.1 (GCA_030228535.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030228535.1 | ||
| HOMD Taxon-ID | HMT-0843 | ||
| Species Name (in use by HOMD) | Dialister micraerophilus | ||
| Organism Name (as deposited) | HMT-843 Dialister micraerophilus UMB10230B.1 | ||
| Strain or Isolate | UMB10230B.1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Dialisteraceae;g__Dialister; s__Dialister micraerophilus |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 54.9111 | ||
| Contigs |
|
||
| Total Sequence Length | 1,226,292 (bp) | ||
| GC Percentage | 35.28 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/228/535/GCA_030228535.1_ASM3022853v1 | ||
| CDS | 1130 | ||
| Genes | 1195 | ||
| mRNA | 1195 | ||
| misc RNA | 20 | ||
| rRNA | 0 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.94 % | ||
| CheckM Completeness | 99.05 % | ||
| CheckM Contamination | 0.48 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3022853v1 |
| GenBank Assembly Accession | GCA_030228535.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030228535.1 [NCBI] |
| BioSample | SAMN35153976 [NCBI] |
| BioProject | PRJNA970254 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2023-05-18T09:46:08.340 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JASOZW01 |
| NCBI TaxID | 309120 |
| Isolation Source | bladder urine |
| Geo Location | USA: Maywood, IL |
