Genome Meta Information: Staphylococcus warneri UMB0046.C (GCA_030230925.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030230925.1 | ||
| HOMD Taxon-ID | HMT-0076 | ||
| Species Name (in use by HOMD) | Staphylococcus warneri | ||
| Organism Name (as deposited) | HMT-076 Staphylococcus warneri UMB0046.C | ||
| Strain or Isolate | UMB0046.C | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus warneri |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 19.9066 | ||
| Contigs |
|
||
| Total Sequence Length | 2,556,987 (bp) | ||
| GC Percentage | 32.4 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/230/925/GCA_030230925.1_ASM3023092v1 | ||
| CDS | 2499 | ||
| Genes | 2585 | ||
| mRNA | 2585 | ||
| misc RNA | 49 | ||
| rRNA | 2 | ||
| tRNA | 34 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.57 % | ||
| CheckM Completeness | 99.59 % | ||
| CheckM Contamination | 0.06 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3023092v1 |
| GenBank Assembly Accession | GCA_030230925.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030230925.1 [NCBI] |
| BioSample | SAMN35153866 [NCBI] |
| BioProject | PRJNA970254 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2023-05-18T09:46:07.043 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JASPEA01 |
| NCBI TaxID | 1292 |
| Isolation Source | urine |
| Geo Location | USA: Maywood, IL |
