Genome Meta Information: Pseudomonas luteola WAC2 (GCA_030403525.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030403525.1 | ||
| HOMD Taxon-ID | HMT-0344 | ||
| Species Name (in use by HOMD) | Pseudomonas luteola | ||
| Organism Name (as deposited) | HMT-344 Pseudomonas luteola WAC2 | ||
| Strain or Isolate | WAC2 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_B; s__Pseudomonas_B luteola |
||
| Sequencing Technology | Illumina NovaSeq | ||
| Genome Coverage | 210.76 | ||
| Contigs |
|
||
| Total Sequence Length | 5,019,075 (bp) | ||
| GC Percentage | 55.39 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/403/525/GCA_030403525.1_ASM3040352v1 | ||
| CDS | 4615 | ||
| Genes | 4730 | ||
| mRNA | 4730 | ||
| misc RNA | 53 | ||
| rRNA | 3 | ||
| tRNA | 58 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.4 % | ||
| CheckM Contamination | 0.4 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3040352v1 |
| GenBank Assembly Accession | GCA_030403525.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030403525.1 [NCBI] |
| BioSample | SAMN35736752 [NCBI] |
| BioProject | PRJNA983803 [NCBI] |
| Submitter | University of New Hampshire |
| Submission Date | 2023-06-14T19:49:07.503 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAUEPD01 |
| NCBI TaxID | 3055057 |
| Isolation Source | crushed rocks in Gara Djebilet Iron Mine |
| Geo Location | Algeria: Gara Djebilet West |
