Genome Meta Information: Lysinibacillus fusiformis PWPW_T2 (GCA_030435155.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030435155.1 | ||
| HOMD Taxon-ID | HMT-0614 | ||
| Species Name (in use by HOMD) | Lysinibacillus fusiformis | ||
| Organism Name (as deposited) | HMT-614 Lysinibacillus fusiformis PWPW_T2 | ||
| Strain or Isolate | PWPW_T2 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Lysinibacillus; s__Lysinibacillus fusiformis |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 66 | ||
| Contigs |
|
||
| Total Sequence Length | 4,820,104 (bp) | ||
| GC Percentage | 37.13 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/435/155/GCA_030435155.1_ASM3043515v1 | ||
| CDS | 4891 | ||
| Genes | 5024 | ||
| mRNA | 5024 | ||
| misc RNA | 91 | ||
| rRNA | 5 | ||
| tRNA | 36 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.32 % | ||
| CheckM Completeness | 85.05 % | ||
| CheckM Contamination | 11.69 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3043515v1 |
| GenBank Assembly Accession | GCA_030435155.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030435155.1 [NCBI] |
| BioSample | SAMN36317136 [NCBI] |
| BioProject | PRJNA991757 [NCBI] |
| Submitter | North West University |
| Submission Date | 2023-07-06T05:11:03.363 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JAUIZN01 |
| NCBI TaxID | 28031 |
| Isolation Source | deteriorating pineapple |
| Geo Location | Nigeria: Lagos |
