Genome Meta Information: Arachnia rubra S18M_Sa_6 (GCA_030527845.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030527845.1 | ||
| HOMD Taxon-ID | HMT-0194 | ||
| Species Name (in use by HOMD) | Arachnia rubra | ||
| Organism Name (as deposited) | HMT-194 Arachnia rubra S18M_Sa_6 | ||
| Strain or Isolate | S18M_Sa_6 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Arachnia; s__Arachnia rubra |
||
| Sequencing Technology | Illumina NovaSeq | ||
| Genome Coverage | 58.6693 | ||
| Contigs |
|
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| Total Sequence Length | 3,183,181 (bp) | ||
| GC Percentage | 64.33 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/527/845/GCA_030527845.1_ASM3052784v1 | ||
| CDS | 2892 | ||
| Genes | 2963 | ||
| mRNA | 2963 | ||
| misc RNA | 18 | ||
| rRNA | 0 | ||
| tRNA | 51 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3052784v1 |
| GenBank Assembly Accession | GCA_030527845.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMN36400168 [NCBI] |
| BioProject | PRJNA983076 [NCBI] |
| Submitter | Center for Bioinformatics |
| Submission Date | 2023-07-11T04:00:15.176 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JAUNAA01 |
| NCBI TaxID | 2021380 |
| Isolation Source | saliva |
| Geo Location | Germany: Zoo Saarbruecken |
