Genome Meta Information: Neisseria gonorrhoeae NJ1914215 (GCA_030644965.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030644965.1 | ||
| HOMD Taxon-ID | HMT-0621 | ||
| Species Name (in use by HOMD) | Neisseria gonorrhoeae | ||
| Organism Name (as deposited) | HMT-621 Neisseria gonorrhoeae NJ1914215 | ||
| Strain or Isolate | NJ1914215 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria gonorrhoeae |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 648 | ||
| Contigs |
|
||
| Total Sequence Length | 2,216,433 (bp) | ||
| GC Percentage | 52.41 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/644/965/GCA_030644965.1_ASM3064496v1 | ||
| CDS | 2214 | ||
| Genes | 2304 | ||
| mRNA | 2304 | ||
| misc RNA | 21 | ||
| rRNA | 12 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.34 % | ||
| CheckM Completeness | 98.08 % | ||
| CheckM Contamination | 0.35 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3064496v1 |
| GenBank Assembly Accession | GCA_030644965.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030644965.1 [NCBI] |
| BioSample | SAMN32487322 [NCBI] |
| BioProject | PRJNA916595 [NCBI] |
| Submitter | Institute of Dermatology, Chinese Academy of Medical Sciences and Peking Union Medical College |
| Submission Date | 2022-12-28T23:57:04.696 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 485 |
| Isolation Source | urethral discharge |
| Geo Location | China: Nanjing |
