Genome Meta Information: Olsenella profusa DSM 13989 (GCA_030811115.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030811115.1 | ||
| HOMD Taxon-ID | HMT-0806 | ||
| Species Name (in use by HOMD) | Olsenella profusa | ||
| Organism Name (as deposited) | HMT-806 Olsenella profusa DSM 13989 | ||
| Strain or Isolate | DSM 13989 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Olsenella_F; s__Olsenella_F profusa |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 369 | ||
| Contigs |
|
||
| Total Sequence Length | 2,616,809 (bp) | ||
| GC Percentage | 64.06 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/811/115/GCA_030811115.1_ASM3081111v1 | ||
| CDS | 2401 | ||
| Genes | 2469 | ||
| mRNA | 2469 | ||
| misc RNA | 15 | ||
| rRNA | 3 | ||
| tRNA | 50 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 85.05 % | ||
| CheckM Contamination | 17.92 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3081111v1 |
| GenBank Assembly Accession | GCA_030811115.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030811115.1 [NCBI] |
| BioSample | SAMN18242992 [NCBI] |
| BioProject | PRJNA708479 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2021-03-10T12:24:05.043 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAUSQK01 |
| NCBI TaxID | 997349 |
| Isolation Source | missing |
| Geo Location | United Kingdom:Guys Hospital, |
