Genome Meta Information: Parabacteroides distasonis GP102 (GCA_030875795.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030875795.1 | ||
| HOMD Taxon-ID | HMT-0973 | ||
| Species Name (in use by HOMD) | Parabacteroides distasonis | ||
| Organism Name (as deposited) | HMT-973 Parabacteroides distasonis GP102 | ||
| Strain or Isolate | GP102 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Parabacteroides; s__Parabacteroides distasonis |
||
| Sequencing Technology | Illumina MiSeq; Oxford Nanopore MinION | ||
| Genome Coverage | 119 | ||
| Contigs |
|
||
| Total Sequence Length | 5,387,833 (bp) | ||
| GC Percentage | 44.79 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/875/795/GCA_030875795.1_ASM3087579v1 | ||
| CDS | 4597 | ||
| Genes | 4727 | ||
| mRNA | 4727 | ||
| misc RNA | 24 | ||
| rRNA | 21 | ||
| tRNA | 84 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.65 % | ||
| CheckM Completeness | 98.88 % | ||
| CheckM Contamination | 2.06 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3087579v1 |
| GenBank Assembly Accession | GCA_030875795.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030875795.1 [NCBI] |
| BioSample | SAMN36841965 [NCBI] |
| BioProject | PRJNA1002373 [NCBI] |
| Submitter | NCTR/FDA |
| Submission Date | 2023-08-04T15:49:04.060 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 823 |
| Isolation Source | |
| Geo Location | USA |
