Genome Meta Information: Neisseria subflava LMG 5313 (GCA_031190635.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_031190635.1 | ||
| HOMD Taxon-ID | HMT-0476 | ||
| Species Name (in use by HOMD) | Neisseria subflava | ||
| Organism Name (as deposited) | HMT-476 Neisseria subflava LMG 5313 | ||
| Strain or Isolate | LMG 5313 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria subflava |
||
| Sequencing Technology | PacBio Sequel IIe | ||
| Genome Coverage | 1 | ||
| Contigs |
|
||
| Total Sequence Length | 2,195,884 (bp) | ||
| GC Percentage | 49.48 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/031/190/635/GCA_031190635.1_ASM3119063v1 | ||
| CDS | 2047 | ||
| Genes | 2151 | ||
| mRNA | 2151 | ||
| misc RNA | 35 | ||
| rRNA | 12 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.5 % | ||
| CheckM Contamination | 0.6 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3119063v1 |
| GenBank Assembly Accession | GCA_031190635.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_031190635.1 [NCBI] |
| BioSample | SAMN37162767 [NCBI] |
| BioProject | PRJNA1009867 [NCBI] |
| Submitter | Zymo Research Corporation |
| Submission Date | 2023-08-28T19:05:04.227 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 28449 |
| Isolation Source | |
| Geo Location | USA |
