Genome Meta Information: Schaalia odontolytica LMG 18080 (GCA_031191545.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_031191545.1 | ||
| HOMD Taxon-ID | HMT-0701 | ||
| Species Name (in use by HOMD) | Schaalia odontolytica | ||
| Organism Name (as deposited) | HMT-701 Schaalia odontolytica LMG 18080 | ||
| Strain or Isolate | LMG 18080 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Pauljensenia; s__Pauljensenia odontolytica |
||
| Sequencing Technology | PacBio Sequel IIe | ||
| Genome Coverage | 1 | ||
| Contigs |
|
||
| Total Sequence Length | 2,455,831 (bp) | ||
| GC Percentage | 64.86 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/031/191/545/GCA_031191545.1_ASM3119154v1 | ||
| CDS | 2057 | ||
| Genes | 2126 | ||
| mRNA | 2126 | ||
| misc RNA | 8 | ||
| rRNA | 9 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 95.83 % | ||
| CheckM Contamination | 3.14 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3119154v1 |
| GenBank Assembly Accession | GCA_031191545.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_031191545.1 [NCBI] |
| BioSample | SAMN37162772 [NCBI] |
| BioProject | PRJNA1009872 [NCBI] |
| Submitter | Zymo Research Corporation |
| Submission Date | 2023-08-28T19:29:03.607 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1660 |
| Isolation Source | |
| Geo Location | USA |
