Genome Meta Information: Fusobacterium polymorphum KCOM1254 (GCA_037577875.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_037577875.1 | ||
| HOMD Taxon-ID | HMT-0202 | ||
| Species Name (in use by HOMD) | Fusobacterium polymorphum | ||
| Organism Name (as deposited) | HMT-202 Fusobacterium polymorphum KCOM1254 | ||
| Strain or Isolate | KCOM1254 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium polymorphum |
||
| Sequencing Technology | PacBio Sequel | ||
| Genome Coverage | 2415 | ||
| Contigs |
|
||
| Total Sequence Length | 2,577,704 (bp) | ||
| GC Percentage | 26.93 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/037/577/875/GCA_037577875.1_ASM3757787v1 | ||
| CDS | 2479 | ||
| Genes | 2565 | ||
| mRNA | 2565 | ||
| misc RNA | 23 | ||
| rRNA | 15 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 92.4 % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3757787v1 |
| GenBank Assembly Accession | GCA_037577875.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMN22215924 [NCBI] |
| BioProject | PRJNA549513 [NCBI] |
| Submitter | Forsyth Institute |
| Submission Date | 2021-10-11T18:25:04.417 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAJAVM01 |
| NCBI TaxID | 851 |
| Isolation Source | oral cavity |
| Geo Location | not available |
