Genome Meta Information: Schaalia meyeri DSM 20733 (GCA_900105015.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900105015.1 | ||
| HOMD Taxon-ID | HMT-0671 | ||
| Species Name (in use by HOMD) | Schaalia meyeri | ||
| Organism Name (as deposited) | HMT-671 Schaalia meyeri DSM 20733 | ||
| Strain or Isolate | DSM 20733 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Pauljensenia; s__Pauljensenia meyeri |
||
| Sequencing Technology | PacBio RS | ||
| Genome Coverage | 790 | ||
| Contigs |
|
||
| Total Sequence Length | 2,026,407 (bp) | ||
| GC Percentage | 65.58 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/105/015/GCA_900105015.1_IMG-taxon_2634166153_annotated_assembly | ||
| CDS | 1748 | ||
| Genes | 1814 | ||
| mRNA | 1814 | ||
| misc RNA | 7 | ||
| rRNA | 10 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 97.24 % | ||
| CheckM Contamination | 1.9 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | IMG-taxon 2634166153 annotated |
| GenBank Assembly Accession | GCA_900105015.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900105015.1 [NCBI] |
| BioSample | SAMN04489715 [NCBI] |
| BioProject | PRJEB16398 [NCBI] |
| Submitter | DOE - JOINT GENOME INSTITUTE |
| Submission Date | 2016-02-12T01:46:03.000 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | FNLK01 |
| NCBI TaxID | 52773 |
| Isolation Source | |
| Geo Location | missing |
